Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.42■■□□□ 1.18
Depdc1bQ8BH88 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1bQ8BH88 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Depdc1bQ8BH88 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.41■■□□□ 1.18
Depdc1bQ8BH88 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.41■■□□□ 1.18
Depdc1bQ8BH88 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.41■■□□□ 1.18
Depdc1bQ8BH88 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Depdc1bQ8BH88 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Depdc1bQ8BH88 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
Depdc1bQ8BH88 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1bQ8BH88 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Depdc1bQ8BH88 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Depdc1bQ8BH88 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Depdc1bQ8BH88 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Depdc1bQ8BH88 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Depdc1bQ8BH88 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Depdc1bQ8BH88 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Depdc1bQ8BH88 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1bQ8BH88 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1bQ8BH88 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.36■■□□□ 1.17
Depdc1bQ8BH88 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1bQ8BH88 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1bQ8BH88 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.36■■□□□ 1.17
Depdc1bQ8BH88 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Depdc1bQ8BH88 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1bQ8BH88 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.35■■□□□ 1.17
Depdc1bQ8BH88 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.35■■□□□ 1.17
Depdc1bQ8BH88 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Depdc1bQ8BH88 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.34■■□□□ 1.17
Depdc1bQ8BH88 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.34■■□□□ 1.17
Depdc1bQ8BH88 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1bQ8BH88 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.34■■□□□ 1.17
Depdc1bQ8BH88 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1bQ8BH88 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Depdc1bQ8BH88 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Depdc1bQ8BH88 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
Depdc1bQ8BH88 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Depdc1bQ8BH88 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.33■■□□□ 1.16
Depdc1bQ8BH88 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Depdc1bQ8BH88 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Depdc1bQ8BH88 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Depdc1bQ8BH88 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.32■■□□□ 1.16
Depdc1bQ8BH88 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Depdc1bQ8BH88 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Depdc1bQ8BH88 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Depdc1bQ8BH88 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Depdc1bQ8BH88 Gm7417-201ENSMUST00000192950 473 ntBASIC22.31■■□□□ 1.16
Depdc1bQ8BH88 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Depdc1bQ8BH88 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1bQ8BH88 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Depdc1bQ8BH88 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.3■■□□□ 1.16
Depdc1bQ8BH88 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.3■■□□□ 1.16
Depdc1bQ8BH88 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Depdc1bQ8BH88 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms