Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim50Q810I2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim50Q810I2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.14■□□□□ 0.81
Trim50Q810I2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim50Q810I2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim50Q810I2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim50Q810I2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim50Q810I2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim50Q810I2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim50Q810I2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim50Q810I2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim50Q810I2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim50Q810I2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim50Q810I2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim50Q810I2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.12■□□□□ 0.81
Trim50Q810I2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim50Q810I2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim50Q810I2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim50Q810I2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim50Q810I2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim50Q810I2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim50Q810I2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim50Q810I2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim50Q810I2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim50Q810I2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim50Q810I2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Trim50Q810I2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim50Q810I2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim50Q810I2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim50Q810I2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim50Q810I2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim50Q810I2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim50Q810I2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.1■□□□□ 0.81
Trim50Q810I2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Trim50Q810I2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim50Q810I2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim50Q810I2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim50Q810I2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim50Q810I2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim50Q810I2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim50Q810I2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim50Q810I2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim50Q810I2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim50Q810I2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim50Q810I2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim50Q810I2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim50Q810I2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim50Q810I2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Trim50Q810I2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim50Q810I2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim50Q810I2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim50Q810I2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim50Q810I2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim50Q810I2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trim50Q810I2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.07■□□□□ 0.8
Trim50Q810I2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trim50Q810I2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim50Q810I2 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.07■□□□□ 0.8
Trim50Q810I2 Gm40881-201ENSMUST00000223397 166 ntBASIC20.07■□□□□ 0.8
Trim50Q810I2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim50Q810I2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim50Q810I2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim50Q810I2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim50Q810I2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim50Q810I2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim50Q810I2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.06■□□□□ 0.8
Trim50Q810I2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim50Q810I2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim50Q810I2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim50Q810I2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.05■□□□□ 0.8
Trim50Q810I2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim50Q810I2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim50Q810I2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim50Q810I2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim50Q810I2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim50Q810I2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim50Q810I2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim50Q810I2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim50Q810I2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim50Q810I2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim50Q810I2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.03■□□□□ 0.8
Trim50Q810I2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim50Q810I2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim50Q810I2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 215.9 ms