Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk3bQ80YF6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk3bQ80YF6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Upk3bQ80YF6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk3bQ80YF6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.39■□□□□ 0.37
Upk3bQ80YF6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk3bQ80YF6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk3bQ80YF6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk3bQ80YF6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Upk3bQ80YF6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bQ80YF6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bQ80YF6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bQ80YF6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bQ80YF6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.34■□□□□ 0.37
Upk3bQ80YF6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bQ80YF6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bQ80YF6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms