Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Shc4Q6S5L9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc4Q6S5L9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shc4Q6S5L9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.31■□□□□ 0.68
Shc4Q6S5L9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Shc4Q6S5L9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc4Q6S5L9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc4Q6S5L9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc4Q6S5L9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc4Q6S5L9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.3■□□□□ 0.68
Shc4Q6S5L9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc4Q6S5L9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shc4Q6S5L9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc4Q6S5L9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc4Q6S5L9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc4Q6S5L9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shc4Q6S5L9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shc4Q6S5L9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc4Q6S5L9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc4Q6S5L9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.24■□□□□ 0.67
Shc4Q6S5L9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.24■□□□□ 0.67
Shc4Q6S5L9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shc4Q6S5L9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shc4Q6S5L9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.23■□□□□ 0.67
Shc4Q6S5L9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.23■□□□□ 0.67
Shc4Q6S5L9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shc4Q6S5L9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shc4Q6S5L9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shc4Q6S5L9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
Shc4Q6S5L9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms