Protein–RNA interactions for Protein: Q6PHN9

Rab35, Ras-related protein Rab-35, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab35Q6PHN9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab35Q6PHN9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rab35Q6PHN9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab35Q6PHN9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab35Q6PHN9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab35Q6PHN9 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.15■□□□□ 0.5
Rab35Q6PHN9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab35Q6PHN9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab35Q6PHN9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rab35Q6PHN9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab35Q6PHN9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab35Q6PHN9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab35Q6PHN9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab35Q6PHN9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab35Q6PHN9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab35Q6PHN9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab35Q6PHN9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab35Q6PHN9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab35Q6PHN9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rab35Q6PHN9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab35Q6PHN9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.08■□□□□ 0.49
Rab35Q6PHN9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rab35Q6PHN9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab35Q6PHN9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab35Q6PHN9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.07■□□□□ 0.48
Rab35Q6PHN9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rab35Q6PHN9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms