Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox17Q61473 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sox17Q61473 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sox17Q61473 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox17Q61473 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox17Q61473 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox17Q61473 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sox17Q61473 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sox17Q61473 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox17Q61473 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sox17Q61473 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox17Q61473 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox17Q61473 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.38■□□□□ 0.69
Sox17Q61473 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sox17Q61473 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox17Q61473 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sox17Q61473 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox17Q61473 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox17Q61473 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox17Q61473 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sox17Q61473 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sox17Q61473 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox17Q61473 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox17Q61473 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sox17Q61473 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox17Q61473 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox17Q61473 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox17Q61473 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.36■□□□□ 0.69
Sox17Q61473 Gm6311-201ENSMUST00000073790 878 ntBASIC19.36■□□□□ 0.69
Sox17Q61473 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox17Q61473 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox17Q61473 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox17Q61473 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox17Q61473 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox17Q61473 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox17Q61473 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox17Q61473 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.35■□□□□ 0.69
Sox17Q61473 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.35■□□□□ 0.69
Sox17Q61473 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.35■□□□□ 0.69
Sox17Q61473 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox17Q61473 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.34■□□□□ 0.69
Sox17Q61473 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sox17Q61473 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox17Q61473 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox17Q61473 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox17Q61473 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox17Q61473 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.34■□□□□ 0.69
Sox17Q61473 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox17Q61473 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox17Q61473 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox17Q61473 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sox17Q61473 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.33■□□□□ 0.69
Sox17Q61473 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox17Q61473 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.33■□□□□ 0.69
Sox17Q61473 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sox17Q61473 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sox17Q61473 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.33■□□□□ 0.68
Sox17Q61473 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox17Q61473 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox17Q61473 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox17Q61473 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sox17Q61473 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox17Q61473 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.32■□□□□ 0.68
Sox17Q61473 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Gm16437-201ENSMUST00000025669 507 ntBASIC19.32■□□□□ 0.68
Sox17Q61473 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.32■□□□□ 0.68
Sox17Q61473 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Sox17Q61473 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox17Q61473 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.32■□□□□ 0.68
Sox17Q61473 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox17Q61473 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sox17Q61473 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sox17Q61473 Scarna2-201ENSMUST00000157560 414 ntBASIC19.31■□□□□ 0.68
Sox17Q61473 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sox17Q61473 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sox17Q61473 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox17Q61473 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox17Q61473 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sox17Q61473 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox17Q61473 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox17Q61473 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox17Q61473 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Sox17Q61473 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox17Q61473 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.3■□□□□ 0.68
Sox17Q61473 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.3■□□□□ 0.68
Sox17Q61473 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox17Q61473 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sox17Q61473 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox17Q61473 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox17Q61473 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox17Q61473 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox17Q61473 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox17Q61473 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox17Q61473 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms