Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.75■□□□□ 0.75
Xrcc1Q60596 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Xrcc1Q60596 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Xrcc1Q60596 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Xrcc1Q60596 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Xrcc1Q60596 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Xrcc1Q60596 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Xrcc1Q60596 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Xrcc1Q60596 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Xrcc1Q60596 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Xrcc1Q60596 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.73■□□□□ 0.75
Xrcc1Q60596 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Xrcc1Q60596 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Xrcc1Q60596 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.73■□□□□ 0.75
Xrcc1Q60596 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Xrcc1Q60596 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Xrcc1Q60596 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Xrcc1Q60596 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.72■□□□□ 0.75
Xrcc1Q60596 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Xrcc1Q60596 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Xrcc1Q60596 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Xrcc1Q60596 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Xrcc1Q60596 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Xrcc1Q60596 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Xrcc1Q60596 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Xrcc1Q60596 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Xrcc1Q60596 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Xrcc1Q60596 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
Xrcc1Q60596 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.67■□□□□ 0.74
Xrcc1Q60596 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Xrcc1Q60596 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Xrcc1Q60596 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Xrcc1Q60596 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Xrcc1Q60596 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Xrcc1Q60596 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Xrcc1Q60596 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Xrcc1Q60596 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Xrcc1Q60596 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Xrcc1Q60596 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.66■□□□□ 0.74
Xrcc1Q60596 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Xrcc1Q60596 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Xrcc1Q60596 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Xrcc1Q60596 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Xrcc1Q60596 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms