Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-2Q5R1I4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav6-2Q5R1I4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Gm8493-201ENSMUST00000196881 489 ntBASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-2Q5R1I4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-2Q5R1I4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-2Q5R1I4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-2Q5R1I4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trav6-2Q5R1I4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-2Q5R1I4 Gm43017-201ENSMUST00000198296 752 ntBASIC18.18■□□□□ 0.5
Trav6-2Q5R1I4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav6-2Q5R1I4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-2Q5R1I4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav6-2Q5R1I4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav6-2Q5R1I4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-2Q5R1I4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-2Q5R1I4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.16■□□□□ 0.5
Trav6-2Q5R1I4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-2Q5R1I4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-2Q5R1I4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-2Q5R1I4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Gm18284-201ENSMUST00000172604 624 ntBASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Gm8495-201ENSMUST00000188740 694 ntBASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-2Q5R1I4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-2Q5R1I4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 147.6 ms