Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Mir6538-201ENSMUST00000183713 110 ntBASIC20.12■□□□□ 0.81
Pfdn4Q3UWL8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn4Q3UWL8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn4Q3UWL8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn4Q3UWL8 Gm14523-201ENSMUST00000117260 558 ntBASIC20.1■□□□□ 0.81
Pfdn4Q3UWL8 Gm7332-201ENSMUST00000118351 454 ntBASIC20.1■□□□□ 0.81
Pfdn4Q3UWL8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pfdn4Q3UWL8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pfdn4Q3UWL8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pfdn4Q3UWL8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pfdn4Q3UWL8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pfdn4Q3UWL8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn4Q3UWL8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pfdn4Q3UWL8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pfdn4Q3UWL8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pfdn4Q3UWL8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.08■□□□□ 0.81
Pfdn4Q3UWL8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pfdn4Q3UWL8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Pfdn4Q3UWL8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn4Q3UWL8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn4Q3UWL8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn4Q3UWL8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn4Q3UWL8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn4Q3UWL8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn4Q3UWL8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn4Q3UWL8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pfdn4Q3UWL8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn4Q3UWL8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn4Q3UWL8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn4Q3UWL8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn4Q3UWL8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn4Q3UWL8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn4Q3UWL8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn4Q3UWL8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn4Q3UWL8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pfdn4Q3UWL8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn4Q3UWL8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pfdn4Q3UWL8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Pfdn4Q3UWL8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pfdn4Q3UWL8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn4Q3UWL8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pfdn4Q3UWL8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn4Q3UWL8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn4Q3UWL8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn4Q3UWL8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn4Q3UWL8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn4Q3UWL8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms