Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.6■□□□□ 0.73
Spg11Q3UHA3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Spg11Q3UHA3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Spg11Q3UHA3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Spg11Q3UHA3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.58■□□□□ 0.72
Spg11Q3UHA3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.58■□□□□ 0.72
Spg11Q3UHA3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Spg11Q3UHA3 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.58■□□□□ 0.72
Spg11Q3UHA3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Spg11Q3UHA3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Spg11Q3UHA3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.57■□□□□ 0.72
Spg11Q3UHA3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.57■□□□□ 0.72
Spg11Q3UHA3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Spg11Q3UHA3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Spg11Q3UHA3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Spg11Q3UHA3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Spg11Q3UHA3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Spg11Q3UHA3 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.56■□□□□ 0.72
Spg11Q3UHA3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Spg11Q3UHA3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Spg11Q3UHA3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.56■□□□□ 0.72
Spg11Q3UHA3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Spg11Q3UHA3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Spg11Q3UHA3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Spg11Q3UHA3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Spg11Q3UHA3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Spg11Q3UHA3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.53■□□□□ 0.72
Spg11Q3UHA3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.52■□□□□ 0.72
Spg11Q3UHA3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Spg11Q3UHA3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.52■□□□□ 0.72
Spg11Q3UHA3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Spg11Q3UHA3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Spg11Q3UHA3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Spg11Q3UHA3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Spg11Q3UHA3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Spg11Q3UHA3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Spg11Q3UHA3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Spg11Q3UHA3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Spg11Q3UHA3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.52■□□□□ 0.71
Spg11Q3UHA3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.52■□□□□ 0.71
Spg11Q3UHA3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.51■□□□□ 0.71
Spg11Q3UHA3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Spg11Q3UHA3 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.51■□□□□ 0.71
Spg11Q3UHA3 Gm13836-201ENSMUST00000121159 501 ntBASIC19.51■□□□□ 0.71
Spg11Q3UHA3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.5■□□□□ 0.71
Spg11Q3UHA3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Spg11Q3UHA3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Spg11Q3UHA3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
Spg11Q3UHA3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.49■□□□□ 0.71
Spg11Q3UHA3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.49■□□□□ 0.71
Spg11Q3UHA3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Spg11Q3UHA3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.49■□□□□ 0.71
Spg11Q3UHA3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Spg11Q3UHA3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.48■□□□□ 0.71
Spg11Q3UHA3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Spg11Q3UHA3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Spg11Q3UHA3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Spg11Q3UHA3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Spg11Q3UHA3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Spg11Q3UHA3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Spg11Q3UHA3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.46■□□□□ 0.71
Spg11Q3UHA3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.46■□□□□ 0.71
Spg11Q3UHA3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Spg11Q3UHA3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg11Q3UHA3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg11Q3UHA3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.46■□□□□ 0.71
Spg11Q3UHA3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms