Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Khdc4Q3TCX3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc4Q3TCX3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc4Q3TCX3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc4Q3TCX3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc4Q3TCX3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Khdc4Q3TCX3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc4Q3TCX3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Khdc4Q3TCX3 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.56■□□□□ 0.72
Khdc4Q3TCX3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc4Q3TCX3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Khdc4Q3TCX3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.56■□□□□ 0.72
Khdc4Q3TCX3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc4Q3TCX3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc4Q3TCX3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Khdc4Q3TCX3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc4Q3TCX3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc4Q3TCX3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.53■□□□□ 0.72
Khdc4Q3TCX3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc4Q3TCX3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc4Q3TCX3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc4Q3TCX3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.52■□□□□ 0.72
Khdc4Q3TCX3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.52■□□□□ 0.71
Khdc4Q3TCX3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Khdc4Q3TCX3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc4Q3TCX3 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc4Q3TCX3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms