Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim4P70271 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pdlim4P70271 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdlim4P70271 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim4P70271 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim4P70271 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim4P70271 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.13■□□□□ 0.33
Pdlim4P70271 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pdlim4P70271 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim4P70271 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim4P70271 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim4P70271 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.12■□□□□ 0.33
Pdlim4P70271 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pdlim4P70271 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdlim4P70271 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Pdlim4P70271 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pdlim4P70271 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim4P70271 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim4P70271 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.1■□□□□ 0.33
Pdlim4P70271 Etf1-202ENSMUST00000180351 108 ntBASIC17.1■□□□□ 0.33
Pdlim4P70271 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.1■□□□□ 0.33
Pdlim4P70271 Rps24-207ENSMUST00000224568 714 ntBASIC17.1■□□□□ 0.33
Pdlim4P70271 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.1■□□□□ 0.33
Pdlim4P70271 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pdlim4P70271 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim4P70271 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim4P70271 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdlim4P70271 Gm40881-201ENSMUST00000223397 166 ntBASIC17.09■□□□□ 0.33
Pdlim4P70271 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim4P70271 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.09■□□□□ 0.33
Pdlim4P70271 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim4P70271 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pdlim4P70271 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdlim4P70271 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim4P70271 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim4P70271 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim4P70271 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim4P70271 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim4P70271 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pdlim4P70271 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim4P70271 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim4P70271 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.08■□□□□ 0.32
Pdlim4P70271 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim4P70271 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.08■□□□□ 0.32
Pdlim4P70271 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.08■□□□□ 0.32
Pdlim4P70271 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim4P70271 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim4P70271 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim4P70271 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Pdlim4P70271 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.08■□□□□ 0.32
Pdlim4P70271 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pdlim4P70271 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim4P70271 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim4P70271 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim4P70271 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.07■□□□□ 0.32
Pdlim4P70271 Gm9959-201ENSMUST00000068277 390 ntBASIC17.07■□□□□ 0.32
Pdlim4P70271 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim4P70271 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim4P70271 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim4P70271 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim4P70271 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Pdlim4P70271 Gm7417-201ENSMUST00000192950 473 ntBASIC17.06■□□□□ 0.32
Pdlim4P70271 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.06■□□□□ 0.32
Pdlim4P70271 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim4P70271 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim4P70271 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim4P70271 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.05■□□□□ 0.32
Pdlim4P70271 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim4P70271 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim4P70271 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim4P70271 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim4P70271 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim4P70271 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.05■□□□□ 0.32
Pdlim4P70271 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim4P70271 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim4P70271 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.04■□□□□ 0.32
Pdlim4P70271 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim4P70271 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim4P70271 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pdlim4P70271 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.04■□□□□ 0.32
Pdlim4P70271 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim4P70271 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim4P70271 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim4P70271 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms