Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.28■□□□□ 0.84
Crnkl1P63154 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.28■□□□□ 0.84
Crnkl1P63154 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.28■□□□□ 0.84
Crnkl1P63154 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.28■□□□□ 0.84
Crnkl1P63154 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Crnkl1P63154 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.28■□□□□ 0.84
Crnkl1P63154 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Crnkl1P63154 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.27■□□□□ 0.84
Crnkl1P63154 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Crnkl1P63154 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.27■□□□□ 0.84
Crnkl1P63154 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.27■□□□□ 0.84
Crnkl1P63154 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Crnkl1P63154 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Crnkl1P63154 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Crnkl1P63154 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Crnkl1P63154 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Crnkl1P63154 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Crnkl1P63154 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Crnkl1P63154 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
Crnkl1P63154 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.26■□□□□ 0.83
Crnkl1P63154 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.26■□□□□ 0.83
Crnkl1P63154 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.26■□□□□ 0.83
Crnkl1P63154 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Crnkl1P63154 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Crnkl1P63154 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crnkl1P63154 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.25■□□□□ 0.83
Crnkl1P63154 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Crnkl1P63154 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crnkl1P63154 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crnkl1P63154 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Crnkl1P63154 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Crnkl1P63154 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Crnkl1P63154 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.24■□□□□ 0.83
Crnkl1P63154 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crnkl1P63154 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crnkl1P63154 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Crnkl1P63154 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.24■□□□□ 0.83
Crnkl1P63154 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crnkl1P63154 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Crnkl1P63154 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Crnkl1P63154 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crnkl1P63154 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.23■□□□□ 0.83
Crnkl1P63154 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.23■□□□□ 0.83
Crnkl1P63154 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Crnkl1P63154 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.22■□□□□ 0.83
Crnkl1P63154 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crnkl1P63154 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crnkl1P63154 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crnkl1P63154 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.21■□□□□ 0.83
Crnkl1P63154 Cap2-205ENSMUST00000225824 1634 ntBASIC20.21■□□□□ 0.83
Crnkl1P63154 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.21■□□□□ 0.83
Crnkl1P63154 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
Crnkl1P63154 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Crnkl1P63154 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crnkl1P63154 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crnkl1P63154 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crnkl1P63154 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crnkl1P63154 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Crnkl1P63154 Gm27502-201ENSMUST00000183495 199 ntBASIC20.2■□□□□ 0.82
Crnkl1P63154 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crnkl1P63154 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Crnkl1P63154 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Crnkl1P63154 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crnkl1P63154 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Crnkl1P63154 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Gm44428-201ENSMUST00000204474 874 ntBASIC20.19■□□□□ 0.82
Crnkl1P63154 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.19■□□□□ 0.82
Crnkl1P63154 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Crnkl1P63154 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Crnkl1P63154 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms