Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ybx1P62960 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.34■■□□□ 1.01
Ybx1P62960 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ybx1P62960 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ybx1P62960 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
Ybx1P62960 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ybx1P62960 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.33■■□□□ 1
Ybx1P62960 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ybx1P62960 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ybx1P62960 Mir7075-201ENSMUST00000184187 82 ntBASIC21.32■■□□□ 1
Ybx1P62960 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ybx1P62960 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ybx1P62960 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ybx1P62960 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ybx1P62960 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ybx1P62960 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ybx1P62960 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Ybx1P62960 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Ybx1P62960 Gm18284-201ENSMUST00000172604 624 ntBASIC21.31■■□□□ 1
Ybx1P62960 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ybx1P62960 Gm8495-201ENSMUST00000188740 694 ntBASIC21.31■■□□□ 1
Ybx1P62960 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Ybx1P62960 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ybx1P62960 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ybx1P62960 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ybx1P62960 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.3■■□□□ 1
Ybx1P62960 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.3■■□□□ 1
Ybx1P62960 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.3■■□□□ 1
Ybx1P62960 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.3■■□□□ 1
Ybx1P62960 Gm43017-201ENSMUST00000198296 752 ntBASIC21.3■■□□□ 1
Ybx1P62960 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ybx1P62960 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ybx1P62960 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.3■■□□□ 1
Ybx1P62960 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ybx1P62960 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ybx1P62960 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ybx1P62960 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ybx1P62960 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ybx1P62960 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ybx1P62960 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ybx1P62960 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ybx1P62960 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.28■■□□□ 1
Ybx1P62960 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ybx1P62960 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ybx1P62960 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.28■■□□□ 1
Ybx1P62960 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ybx1P62960 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ybx1P62960 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ybx1P62960 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ybx1P62960 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ybx1P62960 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Ybx1P62960 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ybx1P62960 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Ybx1P62960 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.27■■□□□ 1
Ybx1P62960 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Ybx1P62960 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ybx1P62960 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.27■■□□□ 1
Ybx1P62960 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ybx1P62960 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ybx1P62960 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ybx1P62960 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ybx1P62960 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ybx1P62960 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ybx1P62960 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.26■□□□□ 0.99
Ybx1P62960 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ybx1P62960 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ybx1P62960 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ybx1P62960 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ybx1P62960 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ybx1P62960 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ybx1P62960 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ybx1P62960 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.25■□□□□ 0.99
Ybx1P62960 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.25■□□□□ 0.99
Ybx1P62960 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ybx1P62960 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ybx1P62960 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ybx1P62960 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ybx1P62960 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ybx1P62960 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ybx1P62960 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Ybx1P62960 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ybx1P62960 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ybx1P62960 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ybx1P62960 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ybx1P62960 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ybx1P62960 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ybx1P62960 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ybx1P62960 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ybx1P62960 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ybx1P62960 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ybx1P62960 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ybx1P62960 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.22■□□□□ 0.99
Ybx1P62960 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ybx1P62960 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms