Protein–RNA interactions for Protein: P60334

Cdo1, Cysteine dioxygenase type 1, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdo1P60334 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdo1P60334 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdo1P60334 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdo1P60334 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdo1P60334 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.29■■□□□ 1
Cdo1P60334 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdo1P60334 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cdo1P60334 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.29■■□□□ 1
Cdo1P60334 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.29■■□□□ 1
Cdo1P60334 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdo1P60334 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.29■■□□□ 1
Cdo1P60334 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdo1P60334 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdo1P60334 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdo1P60334 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.28■■□□□ 1
Cdo1P60334 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
Cdo1P60334 Gm15546-201ENSMUST00000122095 826 ntBASIC21.28■■□□□ 1
Cdo1P60334 Gm10399-202ENSMUST00000202768 748 ntBASIC21.28■■□□□ 1
Cdo1P60334 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cdo1P60334 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdo1P60334 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdo1P60334 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdo1P60334 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdo1P60334 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdo1P60334 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdo1P60334 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdo1P60334 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.26■□□□□ 0.99
Cdo1P60334 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdo1P60334 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cdo1P60334 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cdo1P60334 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdo1P60334 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdo1P60334 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdo1P60334 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdo1P60334 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.25■□□□□ 0.99
Cdo1P60334 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdo1P60334 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdo1P60334 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdo1P60334 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdo1P60334 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdo1P60334 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cdo1P60334 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cdo1P60334 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdo1P60334 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdo1P60334 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdo1P60334 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdo1P60334 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdo1P60334 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdo1P60334 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdo1P60334 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdo1P60334 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.23■□□□□ 0.99
Cdo1P60334 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Cdo1P60334 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cdo1P60334 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdo1P60334 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.22■□□□□ 0.99
Cdo1P60334 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdo1P60334 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdo1P60334 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdo1P60334 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdo1P60334 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.21■□□□□ 0.99
Cdo1P60334 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdo1P60334 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdo1P60334 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdo1P60334 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.21■□□□□ 0.99
Cdo1P60334 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdo1P60334 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cdo1P60334 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cdo1P60334 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdo1P60334 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.2■□□□□ 0.98
Cdo1P60334 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdo1P60334 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdo1P60334 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdo1P60334 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdo1P60334 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdo1P60334 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Cdo1P60334 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdo1P60334 Gm40881-201ENSMUST00000223397 166 ntBASIC21.19■□□□□ 0.98
Cdo1P60334 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdo1P60334 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdo1P60334 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cdo1P60334 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.19■□□□□ 0.98
Cdo1P60334 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdo1P60334 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms