Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn1P54254 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn1P54254 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn1P54254 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atxn1P54254 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atxn1P54254 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn1P54254 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn1P54254 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Atxn1P54254 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn1P54254 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn1P54254 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn1P54254 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn1P54254 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Atxn1P54254 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.5■□□□□ 0.87
Atxn1P54254 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn1P54254 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Atxn1P54254 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn1P54254 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Atxn1P54254 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn1P54254 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn1P54254 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Atxn1P54254 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn1P54254 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn1P54254 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn1P54254 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn1P54254 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn1P54254 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atxn1P54254 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.48■□□□□ 0.87
Atxn1P54254 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.48■□□□□ 0.87
Atxn1P54254 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atxn1P54254 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.48■□□□□ 0.87
Atxn1P54254 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atxn1P54254 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.48■□□□□ 0.87
Atxn1P54254 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.47■□□□□ 0.87
Atxn1P54254 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.47■□□□□ 0.87
Atxn1P54254 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atxn1P54254 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atxn1P54254 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atxn1P54254 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atxn1P54254 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atxn1P54254 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atxn1P54254 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.46■□□□□ 0.87
Atxn1P54254 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atxn1P54254 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.45■□□□□ 0.86
Atxn1P54254 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Atxn1P54254 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.45■□□□□ 0.86
Atxn1P54254 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Atxn1P54254 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atxn1P54254 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atxn1P54254 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.44■□□□□ 0.86
Atxn1P54254 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atxn1P54254 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atxn1P54254 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Atxn1P54254 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atxn1P54254 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Atxn1P54254 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atxn1P54254 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.43■□□□□ 0.86
Atxn1P54254 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.43■□□□□ 0.86
Atxn1P54254 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atxn1P54254 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atxn1P54254 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atxn1P54254 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atxn1P54254 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atxn1P54254 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atxn1P54254 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atxn1P54254 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.42■□□□□ 0.86
Atxn1P54254 Gm37179-201ENSMUST00000194862 823 ntBASIC20.42■□□□□ 0.86
Atxn1P54254 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atxn1P54254 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atxn1P54254 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Atxn1P54254 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Atxn1P54254 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atxn1P54254 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atxn1P54254 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.41■□□□□ 0.86
Atxn1P54254 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.41■□□□□ 0.86
Atxn1P54254 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.41■□□□□ 0.86
Atxn1P54254 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atxn1P54254 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Atxn1P54254 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.41■□□□□ 0.86
Atxn1P54254 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atxn1P54254 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atxn1P54254 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atxn1P54254 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atxn1P54254 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atxn1P54254 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.4■□□□□ 0.86
Atxn1P54254 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms