Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TubP50586 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
TubP50586 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TubP50586 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.2■□□□□ 0.98
TubP50586 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.2■□□□□ 0.98
TubP50586 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TubP50586 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TubP50586 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.19■□□□□ 0.98
TubP50586 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.19■□□□□ 0.98
TubP50586 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TubP50586 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TubP50586 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TubP50586 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TubP50586 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TubP50586 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TubP50586 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TubP50586 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TubP50586 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.18■□□□□ 0.98
TubP50586 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TubP50586 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.18■□□□□ 0.98
TubP50586 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.18■□□□□ 0.98
TubP50586 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TubP50586 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TubP50586 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.17■□□□□ 0.98
TubP50586 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TubP50586 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TubP50586 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TubP50586 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TubP50586 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TubP50586 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TubP50586 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TubP50586 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TubP50586 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.16■□□□□ 0.98
TubP50586 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TubP50586 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TubP50586 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TubP50586 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.15■□□□□ 0.98
TubP50586 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TubP50586 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TubP50586 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.15■□□□□ 0.98
TubP50586 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.15■□□□□ 0.98
TubP50586 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TubP50586 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TubP50586 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TubP50586 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.15■□□□□ 0.98
TubP50586 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TubP50586 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
TubP50586 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TubP50586 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TubP50586 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TubP50586 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.14■□□□□ 0.98
TubP50586 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.14■□□□□ 0.98
TubP50586 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TubP50586 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TubP50586 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TubP50586 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TubP50586 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.13■□□□□ 0.97
TubP50586 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TubP50586 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TubP50586 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TubP50586 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TubP50586 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TubP50586 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TubP50586 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TubP50586 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.12■□□□□ 0.97
TubP50586 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TubP50586 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TubP50586 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.12■□□□□ 0.97
TubP50586 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.12■□□□□ 0.97
TubP50586 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TubP50586 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TubP50586 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TubP50586 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TubP50586 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TubP50586 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TubP50586 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
TubP50586 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TubP50586 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TubP50586 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
TubP50586 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TubP50586 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TubP50586 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TubP50586 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TubP50586 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TubP50586 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TubP50586 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TubP50586 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TubP50586 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
TubP50586 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TubP50586 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TubP50586 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms