Protein–RNA interactions for Protein: P50571

Gabrb1, Gamma-aminobutyric acid receptor subunit beta-1, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrb1P50571 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gabrb1P50571 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gabrb1P50571 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gabrb1P50571 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gabrb1P50571 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gabrb1P50571 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
Gabrb1P50571 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gabrb1P50571 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gabrb1P50571 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gabrb1P50571 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.35■□□□□ 0.53
Gabrb1P50571 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gabrb1P50571 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.35■□□□□ 0.53
Gabrb1P50571 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gabrb1P50571 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gabrb1P50571 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gabrb1P50571 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.34■□□□□ 0.53
Gabrb1P50571 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gabrb1P50571 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gabrb1P50571 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gabrb1P50571 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gabrb1P50571 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gabrb1P50571 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gabrb1P50571 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.33■□□□□ 0.52
Gabrb1P50571 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gabrb1P50571 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gabrb1P50571 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gabrb1P50571 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gabrb1P50571 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gabrb1P50571 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gabrb1P50571 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gabrb1P50571 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gabrb1P50571 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.32■□□□□ 0.52
Gabrb1P50571 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.32■□□□□ 0.52
Gabrb1P50571 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gabrb1P50571 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gabrb1P50571 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gabrb1P50571 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gabrb1P50571 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.31■□□□□ 0.52
Gabrb1P50571 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gabrb1P50571 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gabrb1P50571 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gabrb1P50571 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gabrb1P50571 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gabrb1P50571 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Gabrb1P50571 Gm6311-201ENSMUST00000073790 878 ntBASIC18.3■□□□□ 0.52
Gabrb1P50571 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gabrb1P50571 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gabrb1P50571 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gabrb1P50571 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gabrb1P50571 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gabrb1P50571 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gabrb1P50571 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gabrb1P50571 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gabrb1P50571 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gabrb1P50571 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gabrb1P50571 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gabrb1P50571 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gabrb1P50571 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gabrb1P50571 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gabrb1P50571 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gabrb1P50571 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.29■□□□□ 0.52
Gabrb1P50571 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gabrb1P50571 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.28■□□□□ 0.52
Gabrb1P50571 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gabrb1P50571 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gabrb1P50571 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gabrb1P50571 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.28■□□□□ 0.52
Gabrb1P50571 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gabrb1P50571 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gabrb1P50571 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.27■□□□□ 0.52
Gabrb1P50571 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gabrb1P50571 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gabrb1P50571 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gabrb1P50571 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms