Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TgfaP48030 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TgfaP48030 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TgfaP48030 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TgfaP48030 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TgfaP48030 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TgfaP48030 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TgfaP48030 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.04■□□□□ 0.48
TgfaP48030 Gm43060-201ENSMUST00000200621 289 ntBASIC18.04■□□□□ 0.48
TgfaP48030 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.04■□□□□ 0.48
TgfaP48030 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TgfaP48030 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TgfaP48030 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TgfaP48030 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TgfaP48030 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TgfaP48030 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TgfaP48030 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TgfaP48030 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TgfaP48030 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TgfaP48030 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TgfaP48030 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TgfaP48030 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.03■□□□□ 0.48
TgfaP48030 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TgfaP48030 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.03■□□□□ 0.48
TgfaP48030 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TgfaP48030 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TgfaP48030 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TgfaP48030 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.02■□□□□ 0.48
TgfaP48030 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TgfaP48030 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TgfaP48030 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TgfaP48030 Gm27405-201ENSMUST00000184201 112 ntBASIC18.01■□□□□ 0.47
TgfaP48030 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.01■□□□□ 0.47
TgfaP48030 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TgfaP48030 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TgfaP48030 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TgfaP48030 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TgfaP48030 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TgfaP48030 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TgfaP48030 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TgfaP48030 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.99■□□□□ 0.47
TgfaP48030 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TgfaP48030 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TgfaP48030 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TgfaP48030 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.99■□□□□ 0.47
TgfaP48030 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
TgfaP48030 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TgfaP48030 Gm42642-201ENSMUST00000200683 355 ntBASIC17.99■□□□□ 0.47
TgfaP48030 Spcs1-204ENSMUST00000226782 949 ntBASIC17.99■□□□□ 0.47
TgfaP48030 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.99■□□□□ 0.47
TgfaP48030 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TgfaP48030 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TgfaP48030 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TgfaP48030 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TgfaP48030 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TgfaP48030 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TgfaP48030 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TgfaP48030 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TgfaP48030 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TgfaP48030 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TgfaP48030 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TgfaP48030 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.97■□□□□ 0.47
TgfaP48030 Gm26571-201ENSMUST00000181399 666 ntBASIC17.97■□□□□ 0.47
TgfaP48030 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.97■□□□□ 0.47
TgfaP48030 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.97■□□□□ 0.47
TgfaP48030 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.97■□□□□ 0.47
TgfaP48030 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.97■□□□□ 0.47
TgfaP48030 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TgfaP48030 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TgfaP48030 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TgfaP48030 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TgfaP48030 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TgfaP48030 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TgfaP48030 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TgfaP48030 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TgfaP48030 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.96■□□□□ 0.47
TgfaP48030 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TgfaP48030 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.95■□□□□ 0.46
TgfaP48030 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TgfaP48030 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
TgfaP48030 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.95■□□□□ 0.46
TgfaP48030 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.95■□□□□ 0.46
TgfaP48030 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TgfaP48030 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
TgfaP48030 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TgfaP48030 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TgfaP48030 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.94■□□□□ 0.46
TgfaP48030 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TgfaP48030 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.94■□□□□ 0.46
TgfaP48030 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.94■□□□□ 0.46
TgfaP48030 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.94■□□□□ 0.46
TgfaP48030 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TgfaP48030 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms