Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sox18P43680 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sox18P43680 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox18P43680 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sox18P43680 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox18P43680 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox18P43680 Gm12251-201ENSMUST00000117893 792 ntBASIC19.86■□□□□ 0.77
Sox18P43680 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox18P43680 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox18P43680 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox18P43680 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox18P43680 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox18P43680 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.85■□□□□ 0.77
Sox18P43680 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.85■□□□□ 0.77
Sox18P43680 Gm26833-201ENSMUST00000180899 440 ntBASIC19.85■□□□□ 0.77
Sox18P43680 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.85■□□□□ 0.77
Sox18P43680 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox18P43680 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Sox18P43680 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox18P43680 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sox18P43680 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox18P43680 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox18P43680 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox18P43680 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.84■□□□□ 0.77
Sox18P43680 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox18P43680 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox18P43680 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sox18P43680 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox18P43680 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox18P43680 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.83■□□□□ 0.77
Sox18P43680 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sox18P43680 Gm43060-201ENSMUST00000200621 289 ntBASIC19.83■□□□□ 0.77
Sox18P43680 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox18P43680 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.83■□□□□ 0.76
Sox18P43680 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sox18P43680 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Sox18P43680 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Sox18P43680 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sox18P43680 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Sox18P43680 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox18P43680 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
Sox18P43680 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sox18P43680 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox18P43680 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox18P43680 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox18P43680 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.81■□□□□ 0.76
Sox18P43680 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox18P43680 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox18P43680 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Sox18P43680 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.8■□□□□ 0.76
Sox18P43680 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.8■□□□□ 0.76
Sox18P43680 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox18P43680 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.79■□□□□ 0.76
Sox18P43680 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sox18P43680 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sox18P43680 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sox18P43680 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sox18P43680 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.79■□□□□ 0.76
Sox18P43680 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox18P43680 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox18P43680 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sox18P43680 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.79■□□□□ 0.76
Sox18P43680 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox18P43680 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox18P43680 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox18P43680 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox18P43680 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox18P43680 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.78■□□□□ 0.76
Sox18P43680 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sox18P43680 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.78■□□□□ 0.76
Sox18P43680 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.78■□□□□ 0.76
Sox18P43680 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.78■□□□□ 0.76
Sox18P43680 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.78■□□□□ 0.76
Sox18P43680 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox18P43680 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox18P43680 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sox18P43680 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sox18P43680 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.77■□□□□ 0.76
Sox18P43680 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.77■□□□□ 0.76
Sox18P43680 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox18P43680 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox18P43680 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Sox18P43680 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox18P43680 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox18P43680 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox18P43680 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox18P43680 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox18P43680 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox18P43680 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sox18P43680 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sox18P43680 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.76■□□□□ 0.75
Sox18P43680 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms