Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd9P40240 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cd9P40240 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd9P40240 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cd9P40240 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd9P40240 Gm5812-201ENSMUST00000061073 957 ntBASIC20.51■□□□□ 0.87
Cd9P40240 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd9P40240 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd9P40240 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd9P40240 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cd9P40240 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd9P40240 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd9P40240 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.5■□□□□ 0.87
Cd9P40240 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd9P40240 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd9P40240 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd9P40240 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cd9P40240 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.49■□□□□ 0.87
Cd9P40240 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd9P40240 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.49■□□□□ 0.87
Cd9P40240 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cd9P40240 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd9P40240 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.48■□□□□ 0.87
Cd9P40240 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cd9P40240 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cd9P40240 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd9P40240 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd9P40240 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd9P40240 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.48■□□□□ 0.87
Cd9P40240 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd9P40240 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd9P40240 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cd9P40240 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd9P40240 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd9P40240 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd9P40240 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd9P40240 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd9P40240 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.47■□□□□ 0.87
Cd9P40240 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.47■□□□□ 0.87
Cd9P40240 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.47■□□□□ 0.87
Cd9P40240 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd9P40240 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.47■□□□□ 0.87
Cd9P40240 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.47■□□□□ 0.87
Cd9P40240 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd9P40240 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd9P40240 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.46■□□□□ 0.87
Cd9P40240 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd9P40240 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd9P40240 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd9P40240 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd9P40240 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.45■□□□□ 0.86
Cd9P40240 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cd9P40240 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd9P40240 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd9P40240 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd9P40240 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.44■□□□□ 0.86
Cd9P40240 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.44■□□□□ 0.86
Cd9P40240 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.44■□□□□ 0.86
Cd9P40240 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd9P40240 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd9P40240 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd9P40240 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd9P40240 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd9P40240 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Cd9P40240 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd9P40240 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.42■□□□□ 0.86
Cd9P40240 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Cd9P40240 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd9P40240 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd9P40240 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd9P40240 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cd9P40240 Gm7143-201ENSMUST00000222811 859 ntBASIC20.41■□□□□ 0.86
Cd9P40240 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd9P40240 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd9P40240 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.41■□□□□ 0.86
Cd9P40240 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.41■□□□□ 0.86
Cd9P40240 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd9P40240 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cd9P40240 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cd9P40240 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd9P40240 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cd9P40240 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.4■□□□□ 0.86
Cd9P40240 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cd9P40240 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.39■□□□□ 0.86
Cd9P40240 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms