Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm5786-201ENSMUST00000085368 882 ntBASIC22.6■■□□□ 1.21
Sox5P35710 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox5P35710 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox5P35710 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox5P35710 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Sox5P35710 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Sox5P35710 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox5P35710 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.58■■□□□ 1.21
Sox5P35710 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Sox5P35710 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sox5P35710 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sox5P35710 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Sox5P35710 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.58■■□□□ 1.2
Sox5P35710 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Sox5P35710 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sox5P35710 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sox5P35710 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Sox5P35710 Gm10420-201ENSMUST00000121713 882 ntBASIC22.57■■□□□ 1.2
Sox5P35710 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sox5P35710 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sox5P35710 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.57■■□□□ 1.2
Sox5P35710 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox5P35710 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox5P35710 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox5P35710 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox5P35710 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Sox5P35710 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sox5P35710 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.56■■□□□ 1.2
Sox5P35710 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sox5P35710 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.56■■□□□ 1.2
Sox5P35710 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sox5P35710 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox5P35710 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.55■■□□□ 1.2
Sox5P35710 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox5P35710 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.55■■□□□ 1.2
Sox5P35710 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox5P35710 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox5P35710 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox5P35710 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox5P35710 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox5P35710 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.54■■□□□ 1.2
Sox5P35710 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
Sox5P35710 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.54■■□□□ 1.2
Sox5P35710 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sox5P35710 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sox5P35710 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.54■■□□□ 1.2
Sox5P35710 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sox5P35710 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sox5P35710 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Sox5P35710 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox5P35710 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox5P35710 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox5P35710 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox5P35710 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sox5P35710 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox5P35710 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.53■■□□□ 1.2
Sox5P35710 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Sox5P35710 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Sox5P35710 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Sox5P35710 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
Sox5P35710 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox5P35710 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.52■■□□□ 1.2
Sox5P35710 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox5P35710 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Sox5P35710 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.51■■□□□ 1.19
Sox5P35710 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Sox5P35710 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Sox5P35710 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox5P35710 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox5P35710 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox5P35710 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox5P35710 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox5P35710 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Sox5P35710 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.49■■□□□ 1.19
Sox5P35710 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox5P35710 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms