Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thbs1P35441 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thbs1P35441 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.11■□□□□ 0.65
Thbs1P35441 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thbs1P35441 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thbs1P35441 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Thbs1P35441 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thbs1P35441 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Thbs1P35441 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Thbs1P35441 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thbs1P35441 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Thbs1P35441 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thbs1P35441 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.09■□□□□ 0.65
Thbs1P35441 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thbs1P35441 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thbs1P35441 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thbs1P35441 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.09■□□□□ 0.65
Thbs1P35441 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Thbs1P35441 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thbs1P35441 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Thbs1P35441 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Thbs1P35441 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thbs1P35441 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.08■□□□□ 0.64
Thbs1P35441 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thbs1P35441 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thbs1P35441 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thbs1P35441 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Thbs1P35441 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thbs1P35441 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Thbs1P35441 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thbs1P35441 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thbs1P35441 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thbs1P35441 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thbs1P35441 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Thbs1P35441 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Thbs1P35441 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thbs1P35441 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thbs1P35441 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Thbs1P35441 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thbs1P35441 Gm15546-201ENSMUST00000122095 826 ntBASIC19.06■□□□□ 0.64
Thbs1P35441 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.06■□□□□ 0.64
Thbs1P35441 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
Thbs1P35441 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thbs1P35441 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thbs1P35441 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.06■□□□□ 0.64
Thbs1P35441 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Thbs1P35441 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Thbs1P35441 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thbs1P35441 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Thbs1P35441 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thbs1P35441 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thbs1P35441 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thbs1P35441 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thbs1P35441 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.04■□□□□ 0.64
Thbs1P35441 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thbs1P35441 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thbs1P35441 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.04■□□□□ 0.64
Thbs1P35441 Gm10399-202ENSMUST00000202768 748 ntBASIC19.04■□□□□ 0.64
Thbs1P35441 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thbs1P35441 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Thbs1P35441 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thbs1P35441 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thbs1P35441 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thbs1P35441 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thbs1P35441 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thbs1P35441 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.03■□□□□ 0.64
Thbs1P35441 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Thbs1P35441 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Thbs1P35441 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thbs1P35441 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.02■□□□□ 0.64
Thbs1P35441 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thbs1P35441 Gm10232-201ENSMUST00000089221 720 ntBASIC19.02■□□□□ 0.64
Thbs1P35441 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Thbs1P35441 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thbs1P35441 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thbs1P35441 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thbs1P35441 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Thbs1P35441 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Thbs1P35441 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Thbs1P35441 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Thbs1P35441 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.01■□□□□ 0.63
Thbs1P35441 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.01■□□□□ 0.63
Thbs1P35441 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Thbs1P35441 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Thbs1P35441 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Thbs1P35441 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thbs1P35441 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19■□□□□ 0.63
Thbs1P35441 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19■□□□□ 0.63
Thbs1P35441 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thbs1P35441 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thbs1P35441 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Thbs1P35441 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms