Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp13P33435 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Mmp13P33435 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Mmp13P33435 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp13P33435 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp13P33435 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp13P33435 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp13P33435 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp13P33435 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp13P33435 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp13P33435 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp13P33435 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp13P33435 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp13P33435 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Mmp13P33435 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Mmp13P33435 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.06■□□□□ 0.96
Mmp13P33435 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp13P33435 Gm15546-201ENSMUST00000122095 826 ntBASIC21.06■□□□□ 0.96
Mmp13P33435 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Mmp13P33435 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp13P33435 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp13P33435 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp13P33435 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp13P33435 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp13P33435 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp13P33435 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.05■□□□□ 0.96
Mmp13P33435 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Mmp13P33435 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp13P33435 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp13P33435 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp13P33435 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Mmp13P33435 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Mmp13P33435 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.04■□□□□ 0.96
Mmp13P33435 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.04■□□□□ 0.96
Mmp13P33435 Gm15820-201ENSMUST00000201566 728 ntBASIC21.04■□□□□ 0.96
Mmp13P33435 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.04■□□□□ 0.96
Mmp13P33435 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
Mmp13P33435 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Mmp13P33435 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Mmp13P33435 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp13P33435 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp13P33435 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Mmp13P33435 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp13P33435 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Mmp13P33435 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.03■□□□□ 0.96
Mmp13P33435 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.03■□□□□ 0.96
Mmp13P33435 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp13P33435 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp13P33435 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp13P33435 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp13P33435 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp13P33435 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp13P33435 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp13P33435 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp13P33435 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Mmp13P33435 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp13P33435 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.02■□□□□ 0.96
Mmp13P33435 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp13P33435 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Mmp13P33435 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Mmp13P33435 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Mmp13P33435 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp13P33435 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp13P33435 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mmp13P33435 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mmp13P33435 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21■□□□□ 0.95
Mmp13P33435 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mmp13P33435 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21■□□□□ 0.95
Mmp13P33435 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp13P33435 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp13P33435 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp13P33435 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Mmp13P33435 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.99■□□□□ 0.95
Mmp13P33435 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Mmp13P33435 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp13P33435 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms