Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd40P27512 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Cd40P27512 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cd40P27512 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.77■□□□□ 0.6
Cd40P27512 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd40P27512 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd40P27512 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd40P27512 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cd40P27512 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Cd40P27512 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cd40P27512 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd40P27512 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Cd40P27512 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd40P27512 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd40P27512 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd40P27512 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd40P27512 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Cd40P27512 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd40P27512 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd40P27512 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd40P27512 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cd40P27512 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd40P27512 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd40P27512 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd40P27512 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd40P27512 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.74■□□□□ 0.59
Cd40P27512 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.74■□□□□ 0.59
Cd40P27512 Rps24-207ENSMUST00000224568 714 ntBASIC18.74■□□□□ 0.59
Cd40P27512 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cd40P27512 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd40P27512 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cd40P27512 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd40P27512 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cd40P27512 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd40P27512 Gm45102-201ENSMUST00000207427 857 ntBASIC18.73■□□□□ 0.59
Cd40P27512 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cd40P27512 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cd40P27512 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cd40P27512 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd40P27512 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
Cd40P27512 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd40P27512 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cd40P27512 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd40P27512 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd40P27512 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cd40P27512 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd40P27512 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd40P27512 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd40P27512 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd40P27512 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cd40P27512 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.71■□□□□ 0.59
Cd40P27512 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cd40P27512 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cd40P27512 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd40P27512 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd40P27512 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.71■□□□□ 0.59
Cd40P27512 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd40P27512 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd40P27512 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd40P27512 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.71■□□□□ 0.59
Cd40P27512 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd40P27512 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cd40P27512 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.7■□□□□ 0.58
Cd40P27512 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd40P27512 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.7■□□□□ 0.58
Cd40P27512 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd40P27512 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd40P27512 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd40P27512 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cd40P27512 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Cd40P27512 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd40P27512 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd40P27512 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd40P27512 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd40P27512 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd40P27512 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd40P27512 Gm14117-201ENSMUST00000122417 843 ntBASIC18.68■□□□□ 0.58
Cd40P27512 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd40P27512 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cd40P27512 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cd40P27512 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd40P27512 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd40P27512 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd40P27512 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cd40P27512 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd40P27512 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd40P27512 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.67■□□□□ 0.58
Cd40P27512 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd40P27512 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd40P27512 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd40P27512 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cd40P27512 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cd40P27512 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.66■□□□□ 0.58
Cd40P27512 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.66■□□□□ 0.58
Cd40P27512 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.66■□□□□ 0.58
Cd40P27512 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd40P27512 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd40P27512 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd40P27512 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cd40P27512 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms