Protein–RNA interactions for Protein: P15388

Kcnc1, Potassium voltage-gated channel subfamily C member 1, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc1P15388 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcnc1P15388 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcnc1P15388 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Kcnc1P15388 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnc1P15388 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnc1P15388 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.26■□□□□ 0.83
Kcnc1P15388 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.26■□□□□ 0.83
Kcnc1P15388 Gm5921-201ENSMUST00000075898 882 ntBASIC20.26■□□□□ 0.83
Kcnc1P15388 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnc1P15388 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnc1P15388 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Kcnc1P15388 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Kcnc1P15388 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnc1P15388 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnc1P15388 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Kcnc1P15388 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.24■□□□□ 0.83
Kcnc1P15388 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnc1P15388 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Kcnc1P15388 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnc1P15388 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnc1P15388 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnc1P15388 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnc1P15388 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnc1P15388 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnc1P15388 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnc1P15388 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.23■□□□□ 0.83
Kcnc1P15388 Gm43566-201ENSMUST00000196851 808 ntBASIC20.23■□□□□ 0.83
Kcnc1P15388 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
Kcnc1P15388 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnc1P15388 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnc1P15388 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.23■□□□□ 0.83
Kcnc1P15388 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnc1P15388 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnc1P15388 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Kcnc1P15388 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Kcnc1P15388 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnc1P15388 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnc1P15388 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Kcnc1P15388 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Kcnc1P15388 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnc1P15388 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnc1P15388 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnc1P15388 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnc1P15388 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnc1P15388 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnc1P15388 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.18■□□□□ 0.82
Kcnc1P15388 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnc1P15388 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.18■□□□□ 0.82
Kcnc1P15388 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Kcnc1P15388 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnc1P15388 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnc1P15388 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Kcnc1P15388 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnc1P15388 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnc1P15388 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kcnc1P15388 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.17■□□□□ 0.82
Kcnc1P15388 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnc1P15388 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnc1P15388 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnc1P15388 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Kcnc1P15388 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Kcnc1P15388 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnc1P15388 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnc1P15388 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Kcnc1P15388 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kcnc1P15388 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kcnc1P15388 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.15■□□□□ 0.82
Kcnc1P15388 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms