Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rb1P13405 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rb1P13405 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rb1P13405 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Rb1P13405 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rb1P13405 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.89■□□□□ 0.93
Rb1P13405 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.89■□□□□ 0.93
Rb1P13405 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.89■□□□□ 0.93
Rb1P13405 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rb1P13405 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rb1P13405 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rb1P13405 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rb1P13405 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rb1P13405 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rb1P13405 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rb1P13405 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rb1P13405 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rb1P13405 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rb1P13405 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rb1P13405 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rb1P13405 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rb1P13405 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rb1P13405 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rb1P13405 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.87■□□□□ 0.93
Rb1P13405 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.87■□□□□ 0.93
Rb1P13405 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rb1P13405 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.87■□□□□ 0.93
Rb1P13405 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rb1P13405 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Rb1P13405 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.87■□□□□ 0.93
Rb1P13405 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rb1P13405 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rb1P13405 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.86■□□□□ 0.93
Rb1P13405 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rb1P13405 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rb1P13405 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rb1P13405 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rb1P13405 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rb1P13405 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rb1P13405 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rb1P13405 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rb1P13405 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rb1P13405 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rb1P13405 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.84■□□□□ 0.93
Rb1P13405 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.84■□□□□ 0.93
Rb1P13405 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rb1P13405 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.84■□□□□ 0.93
Rb1P13405 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rb1P13405 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rb1P13405 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rb1P13405 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rb1P13405 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rb1P13405 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.83■□□□□ 0.92
Rb1P13405 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.83■□□□□ 0.92
Rb1P13405 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rb1P13405 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.82■□□□□ 0.92
Rb1P13405 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rb1P13405 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rb1P13405 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rb1P13405 Gm45417-201ENSMUST00000209533 758 ntBASIC20.82■□□□□ 0.92
Rb1P13405 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rb1P13405 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rb1P13405 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rb1P13405 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.82■□□□□ 0.92
Rb1P13405 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rb1P13405 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rb1P13405 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rb1P13405 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rb1P13405 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rb1P13405 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rb1P13405 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rb1P13405 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rb1P13405 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rb1P13405 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rb1P13405 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rb1P13405 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.81■□□□□ 0.92
Rb1P13405 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rb1P13405 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rb1P13405 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.79■□□□□ 0.92
Rb1P13405 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rb1P13405 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rb1P13405 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rb1P13405 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms