Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.55■□□□□ 0.72
ApoeP08226 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ApoeP08226 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ApoeP08226 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ApoeP08226 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ApoeP08226 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ApoeP08226 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ApoeP08226 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ApoeP08226 Gm9806-201ENSMUST00000051080 552 ntBASIC19.54■□□□□ 0.72
ApoeP08226 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ApoeP08226 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ApoeP08226 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ApoeP08226 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ApoeP08226 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ApoeP08226 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ApoeP08226 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ApoeP08226 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ApoeP08226 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 Scarna2-201ENSMUST00000157560 414 ntBASIC19.52■□□□□ 0.72
ApoeP08226 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.52■□□□□ 0.72
ApoeP08226 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ApoeP08226 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ApoeP08226 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ApoeP08226 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ApoeP08226 Gm16437-201ENSMUST00000025669 507 ntBASIC19.51■□□□□ 0.71
ApoeP08226 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ApoeP08226 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ApoeP08226 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ApoeP08226 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ApoeP08226 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ApoeP08226 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.5■□□□□ 0.71
ApoeP08226 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.5■□□□□ 0.71
ApoeP08226 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ApoeP08226 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ApoeP08226 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ApoeP08226 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ApoeP08226 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ApoeP08226 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ApoeP08226 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ApoeP08226 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ApoeP08226 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
ApoeP08226 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ApoeP08226 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ApoeP08226 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.47■□□□□ 0.71
ApoeP08226 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ApoeP08226 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.47■□□□□ 0.71
ApoeP08226 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ApoeP08226 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ApoeP08226 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ApoeP08226 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ApoeP08226 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ApoeP08226 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.46■□□□□ 0.71
ApoeP08226 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ApoeP08226 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ApoeP08226 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ApoeP08226 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.45■□□□□ 0.7
ApoeP08226 Golph3-202ENSMUST00000226517 2359 ntBASIC19.45■□□□□ 0.7
ApoeP08226 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ApoeP08226 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.45■□□□□ 0.7
ApoeP08226 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ApoeP08226 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ApoeP08226 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ApoeP08226 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms