Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt1P04104 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.51■□□□□ 0.71
Krt1P04104 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt1P04104 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt1P04104 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Krt1P04104 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Krt1P04104 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt1P04104 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt1P04104 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Krt1P04104 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt1P04104 Mir3960-201ENSMUST00000198213 73 ntBASIC19.5■□□□□ 0.71
Krt1P04104 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt1P04104 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krt1P04104 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Krt1P04104 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Krt1P04104 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt1P04104 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt1P04104 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt1P04104 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt1P04104 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt1P04104 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.49■□□□□ 0.71
Krt1P04104 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Krt1P04104 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.49■□□□□ 0.71
Krt1P04104 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Krt1P04104 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.49■□□□□ 0.71
Krt1P04104 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krt1P04104 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krt1P04104 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krt1P04104 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krt1P04104 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Krt1P04104 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krt1P04104 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Krt1P04104 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Krt1P04104 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krt1P04104 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Krt1P04104 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt1P04104 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Krt1P04104 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Krt1P04104 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt1P04104 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.44■□□□□ 0.7
Krt1P04104 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.44■□□□□ 0.7
Krt1P04104 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.44■□□□□ 0.7
Krt1P04104 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.44■□□□□ 0.7
Krt1P04104 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Krt1P04104 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Krt1P04104 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt1P04104 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Krt1P04104 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt1P04104 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Krt1P04104 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt1P04104 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt1P04104 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt1P04104 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.42■□□□□ 0.7
Krt1P04104 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt1P04104 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt1P04104 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Krt1P04104 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.42■□□□□ 0.7
Krt1P04104 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Krt1P04104 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.42■□□□□ 0.7
Krt1P04104 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.42■□□□□ 0.7
Krt1P04104 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt1P04104 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt1P04104 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Krt1P04104 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt1P04104 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt1P04104 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt1P04104 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.41■□□□□ 0.7
Krt1P04104 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt1P04104 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.41■□□□□ 0.7
Krt1P04104 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms