Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col4a1P02463 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Col4a1P02463 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col4a1P02463 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col4a1P02463 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Col4a1P02463 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col4a1P02463 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col4a1P02463 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col4a1P02463 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col4a1P02463 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col4a1P02463 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Col4a1P02463 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col4a1P02463 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col4a1P02463 Gm21168-201ENSMUST00000199646 1096 ntBASIC25.97■■□□□ 1.75
Col4a1P02463 Gm8495-201ENSMUST00000188740 694 ntBASIC25.96■■□□□ 1.75
Col4a1P02463 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col4a1P02463 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Col4a1P02463 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Col4a1P02463 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col4a1P02463 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC25.96■■□□□ 1.75
Col4a1P02463 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.95■■□□□ 1.74
Col4a1P02463 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col4a1P02463 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Col4a1P02463 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Col4a1P02463 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC25.93■■□□□ 1.74
Col4a1P02463 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Col4a1P02463 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC25.93■■□□□ 1.74
Col4a1P02463 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
Col4a1P02463 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Col4a1P02463 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col4a1P02463 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col4a1P02463 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col4a1P02463 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col4a1P02463 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.92■■□□□ 1.74
Col4a1P02463 Flvcr1-202ENSMUST00000191946 1216 ntBASIC25.92■■□□□ 1.74
Col4a1P02463 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col4a1P02463 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Col4a1P02463 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Col4a1P02463 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Col4a1P02463 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col4a1P02463 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC25.91■■□□□ 1.74
Col4a1P02463 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Col4a1P02463 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col4a1P02463 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col4a1P02463 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Col4a1P02463 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC25.9■■□□□ 1.74
Col4a1P02463 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col4a1P02463 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col4a1P02463 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col4a1P02463 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col4a1P02463 Gm8493-201ENSMUST00000196881 489 ntBASIC25.9■■□□□ 1.74
Col4a1P02463 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC25.9■■□□□ 1.74
Col4a1P02463 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Col4a1P02463 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Col4a1P02463 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Col4a1P02463 Gm6085-201ENSMUST00000182774 1470 ntBASIC25.89■■□□□ 1.74
Col4a1P02463 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Col4a1P02463 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Col4a1P02463 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Col4a1P02463 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC25.89■■□□□ 1.73
Col4a1P02463 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Col4a1P02463 Gm43530-201ENSMUST00000195920 274 ntBASIC25.89■■□□□ 1.73
Col4a1P02463 Wdr70-203ENSMUST00000227371 1130 ntBASIC25.89■■□□□ 1.73
Col4a1P02463 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.89■■□□□ 1.73
Col4a1P02463 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Col4a1P02463 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Col4a1P02463 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Col4a1P02463 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.88■■□□□ 1.73
Col4a1P02463 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC25.88■■□□□ 1.73
Col4a1P02463 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC25.88■■□□□ 1.73
Col4a1P02463 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col4a1P02463 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
Col4a1P02463 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Col4a1P02463 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC25.87■■□□□ 1.73
Col4a1P02463 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Col4a1P02463 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col4a1P02463 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.87■■□□□ 1.73
Col4a1P02463 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Col4a1P02463 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col4a1P02463 Gm26571-201ENSMUST00000181399 666 ntBASIC25.86■■□□□ 1.73
Col4a1P02463 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC25.86■■□□□ 1.73
Col4a1P02463 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.86■■□□□ 1.73
Col4a1P02463 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col4a1P02463 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms