Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01852 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
P01852 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
P01852 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P01852 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01852 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01852 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.84■□□□□ 0.61
P01852 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.84■□□□□ 0.61
P01852 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01852 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P01852 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01852 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P01852 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01852 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01852 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01852 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01852 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01852 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01852 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01852 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P01852 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01852 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01852 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01852 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01852 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.82■□□□□ 0.6
P01852 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
P01852 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01852 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01852 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01852 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
P01852 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.81■□□□□ 0.6
P01852 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
P01852 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
P01852 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01852 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01852 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.8■□□□□ 0.6
P01852 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
P01852 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.8■□□□□ 0.6
P01852 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.8■□□□□ 0.6
P01852 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01852 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01852 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01852 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01852 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01852 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01852 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01852 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
P01852 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01852 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
P01852 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.79■□□□□ 0.6
P01852 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.78■□□□□ 0.6
P01852 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
P01852 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Gm22238-201ENSMUST00000175222 88 ntBASIC18.78■□□□□ 0.6
P01852 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
P01852 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
P01852 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01852 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01852 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
P01852 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01852 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.77■□□□□ 0.6
P01852 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P01852 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P01852 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.77■□□□□ 0.6
P01852 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01852 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
P01852 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
P01852 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
P01852 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.77■□□□□ 0.6
P01852 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P01852 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01852 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.75■□□□□ 0.59
P01852 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
P01852 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
P01852 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms