Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops4O88544 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops4O88544 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops4O88544 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops4O88544 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops4O88544 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops4O88544 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops4O88544 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops4O88544 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cops4O88544 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops4O88544 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.98■□□□□ 0.63
Cops4O88544 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cops4O88544 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops4O88544 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cops4O88544 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops4O88544 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cops4O88544 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cops4O88544 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops4O88544 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cops4O88544 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops4O88544 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops4O88544 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops4O88544 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops4O88544 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
Cops4O88544 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops4O88544 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Cops4O88544 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.95■□□□□ 0.62
Cops4O88544 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops4O88544 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cops4O88544 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops4O88544 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cops4O88544 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cops4O88544 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops4O88544 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.93■□□□□ 0.62
Cops4O88544 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.93■□□□□ 0.62
Cops4O88544 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.93■□□□□ 0.62
Cops4O88544 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.93■□□□□ 0.62
Cops4O88544 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cops4O88544 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cops4O88544 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops4O88544 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cops4O88544 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops4O88544 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cops4O88544 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops4O88544 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops4O88544 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.92■□□□□ 0.62
Cops4O88544 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.92■□□□□ 0.62
Cops4O88544 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops4O88544 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Cops4O88544 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.91■□□□□ 0.62
Cops4O88544 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cops4O88544 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cops4O88544 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cops4O88544 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.9■□□□□ 0.62
Cops4O88544 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops4O88544 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
Cops4O88544 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cops4O88544 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops4O88544 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cops4O88544 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops4O88544 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops4O88544 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops4O88544 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Cops4O88544 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops4O88544 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms