Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ubr1O70481 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ubr1O70481 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ubr1O70481 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC27.48■■□□□ 1.99
Ubr1O70481 Gm21168-201ENSMUST00000199646 1096 ntBASIC27.48■■□□□ 1.99
Ubr1O70481 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ubr1O70481 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Ubr1O70481 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC27.48■■□□□ 1.99
Ubr1O70481 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Ubr1O70481 Gm5576-201ENSMUST00000075809 1236 ntBASIC27.48■■□□□ 1.99
Ubr1O70481 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC27.47■■□□□ 1.99
Ubr1O70481 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Ubr1O70481 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ubr1O70481 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ubr1O70481 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC27.46■■□□□ 1.99
Ubr1O70481 Spcs1-204ENSMUST00000226782 949 ntBASIC27.46■■□□□ 1.99
Ubr1O70481 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ubr1O70481 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Ubr1O70481 Gm42418-201ENSMUST00000182010 1831 ntBASIC27.46■■□□□ 1.99
Ubr1O70481 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC27.46■■□□□ 1.99
Ubr1O70481 Wdr70-203ENSMUST00000227371 1130 ntBASIC27.45■■□□□ 1.99
Ubr1O70481 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ubr1O70481 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ubr1O70481 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ubr1O70481 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ubr1O70481 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ubr1O70481 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ubr1O70481 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ubr1O70481 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ubr1O70481 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Ubr1O70481 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC27.43■■□□□ 1.98
Ubr1O70481 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ubr1O70481 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ubr1O70481 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ubr1O70481 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ubr1O70481 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Ubr1O70481 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ubr1O70481 Gm8495-201ENSMUST00000188740 694 ntBASIC27.43■■□□□ 1.98
Ubr1O70481 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Ubr1O70481 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Ubr1O70481 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ubr1O70481 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ubr1O70481 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr1O70481 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr1O70481 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr1O70481 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Ubr1O70481 Flvcr1-202ENSMUST00000191946 1216 ntBASIC27.41■■□□□ 1.98
Ubr1O70481 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr1O70481 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr1O70481 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ubr1O70481 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC27.41■■□□□ 1.98
Ubr1O70481 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Ubr1O70481 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ubr1O70481 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ubr1O70481 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ubr1O70481 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC27.4■■□□□ 1.98
Ubr1O70481 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC27.4■■□□□ 1.98
Ubr1O70481 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC27.4■■□□□ 1.98
Ubr1O70481 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Ubr1O70481 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Ubr1O70481 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubr1O70481 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ubr1O70481 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ubr1O70481 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ubr1O70481 Gm8493-201ENSMUST00000196881 489 ntBASIC27.37■■□□□ 1.97
Ubr1O70481 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ubr1O70481 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ubr1O70481 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC27.37■■□□□ 1.97
Ubr1O70481 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC27.37■■□□□ 1.97
Ubr1O70481 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr1O70481 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr1O70481 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr1O70481 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr1O70481 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC27.36■■□□□ 1.97
Ubr1O70481 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC27.36■■□□□ 1.97
Ubr1O70481 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC27.36■■□□□ 1.97
Ubr1O70481 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC27.36■■□□□ 1.97
Ubr1O70481 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ubr1O70481 H3f3aos-201ENSMUST00000097448 2905 ntBASIC27.36■■□□□ 1.97
Ubr1O70481 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr1O70481 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC27.35■■□□□ 1.97
Ubr1O70481 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC27.35■■□□□ 1.97
Ubr1O70481 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC27.35■■□□□ 1.97
Ubr1O70481 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Ubr1O70481 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr1O70481 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr1O70481 AC164883.3-201ENSMUST00000227396 1774 ntBASIC27.35■■□□□ 1.97
Ubr1O70481 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr1O70481 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC27.35■■□□□ 1.97
Ubr1O70481 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubr1O70481 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr1O70481 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr1O70481 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Ubr1O70481 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr1O70481 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr1O70481 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr1O70481 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubr1O70481 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr1O70481 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr1O70481 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms