Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh12O55134 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh12O55134 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh12O55134 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh12O55134 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh12O55134 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh12O55134 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.69■□□□□ 0.58
Pcdh12O55134 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh12O55134 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.69■□□□□ 0.58
Pcdh12O55134 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.69■□□□□ 0.58
Pcdh12O55134 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh12O55134 Gm9959-201ENSMUST00000068277 390 ntBASIC18.69■□□□□ 0.58
Pcdh12O55134 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh12O55134 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh12O55134 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh12O55134 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Pcdh12O55134 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh12O55134 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh12O55134 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh12O55134 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh12O55134 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh12O55134 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh12O55134 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdh12O55134 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh12O55134 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh12O55134 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh12O55134 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh12O55134 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh12O55134 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdh12O55134 Gm10399-202ENSMUST00000202768 748 ntBASIC18.66■□□□□ 0.58
Pcdh12O55134 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdh12O55134 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh12O55134 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh12O55134 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh12O55134 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh12O55134 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh12O55134 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh12O55134 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdh12O55134 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.65■□□□□ 0.58
Pcdh12O55134 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh12O55134 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh12O55134 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh12O55134 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.65■□□□□ 0.58
Pcdh12O55134 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Pcdh12O55134 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh12O55134 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh12O55134 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 Gm14117-201ENSMUST00000122417 843 ntBASIC18.64■□□□□ 0.57
Pcdh12O55134 Etf1-202ENSMUST00000180351 108 ntBASIC18.64■□□□□ 0.57
Pcdh12O55134 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdh12O55134 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh12O55134 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh12O55134 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.63■□□□□ 0.57
Pcdh12O55134 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh12O55134 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh12O55134 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh12O55134 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh12O55134 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh12O55134 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh12O55134 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh12O55134 Gm40881-201ENSMUST00000223397 166 ntBASIC18.62■□□□□ 0.57
Pcdh12O55134 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh12O55134 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdh12O55134 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh12O55134 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh12O55134 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh12O55134 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdh12O55134 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdh12O55134 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdh12O55134 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh12O55134 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh12O55134 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh12O55134 Gm7417-201ENSMUST00000192950 473 ntBASIC18.6■□□□□ 0.57
Pcdh12O55134 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcdh12O55134 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh12O55134 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms