Protein–RNA interactions for Protein: O54774

Ap3d1, AP-3 complex subunit delta-1, mousemouse

Predictions only

Length 1,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3d1O54774 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.11■□□□□ 0.97
Ap3d1O54774 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Ap3d1O54774 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.11■□□□□ 0.97
Ap3d1O54774 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.11■□□□□ 0.97
Ap3d1O54774 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ap3d1O54774 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ap3d1O54774 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Ap3d1O54774 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ap3d1O54774 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ap3d1O54774 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.1■□□□□ 0.97
Ap3d1O54774 Gm22238-201ENSMUST00000175222 88 ntBASIC21.1■□□□□ 0.97
Ap3d1O54774 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.1■□□□□ 0.97
Ap3d1O54774 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ap3d1O54774 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ap3d1O54774 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ap3d1O54774 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ap3d1O54774 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ap3d1O54774 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ap3d1O54774 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ap3d1O54774 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.09■□□□□ 0.97
Ap3d1O54774 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ap3d1O54774 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ap3d1O54774 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ap3d1O54774 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ap3d1O54774 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.08■□□□□ 0.97
Ap3d1O54774 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.08■□□□□ 0.97
Ap3d1O54774 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ap3d1O54774 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ap3d1O54774 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ap3d1O54774 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ap3d1O54774 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.07■□□□□ 0.96
Ap3d1O54774 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ap3d1O54774 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.07■□□□□ 0.96
Ap3d1O54774 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Ap3d1O54774 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ap3d1O54774 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.06■□□□□ 0.96
Ap3d1O54774 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ap3d1O54774 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ap3d1O54774 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ap3d1O54774 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.06■□□□□ 0.96
Ap3d1O54774 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.06■□□□□ 0.96
Ap3d1O54774 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ap3d1O54774 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ap3d1O54774 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ap3d1O54774 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ap3d1O54774 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ap3d1O54774 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ap3d1O54774 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
Ap3d1O54774 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ap3d1O54774 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ap3d1O54774 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.05■□□□□ 0.96
Ap3d1O54774 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ap3d1O54774 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ap3d1O54774 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ap3d1O54774 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ap3d1O54774 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ap3d1O54774 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ap3d1O54774 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ap3d1O54774 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ap3d1O54774 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ap3d1O54774 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ap3d1O54774 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ap3d1O54774 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ap3d1O54774 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Ap3d1O54774 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Ap3d1O54774 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ap3d1O54774 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.02■□□□□ 0.96
Ap3d1O54774 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ap3d1O54774 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ap3d1O54774 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ap3d1O54774 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ap3d1O54774 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ap3d1O54774 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ap3d1O54774 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Ap3d1O54774 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms