Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Abca4O35600 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abca4O35600 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.93■□□□□ 0.78
Abca4O35600 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Abca4O35600 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.92■□□□□ 0.78
Abca4O35600 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abca4O35600 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abca4O35600 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abca4O35600 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Abca4O35600 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.91■□□□□ 0.78
Abca4O35600 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abca4O35600 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abca4O35600 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abca4O35600 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abca4O35600 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.91■□□□□ 0.78
Abca4O35600 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.91■□□□□ 0.78
Abca4O35600 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abca4O35600 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abca4O35600 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abca4O35600 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abca4O35600 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abca4O35600 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abca4O35600 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Abca4O35600 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.89■□□□□ 0.78
Abca4O35600 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abca4O35600 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Abca4O35600 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.88■□□□□ 0.77
Abca4O35600 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.88■□□□□ 0.77
Abca4O35600 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abca4O35600 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abca4O35600 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.88■□□□□ 0.77
Abca4O35600 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Abca4O35600 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Abca4O35600 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.88■□□□□ 0.77
Abca4O35600 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.87■□□□□ 0.77
Abca4O35600 Gm8520-201ENSMUST00000186517 868 ntBASIC19.87■□□□□ 0.77
Abca4O35600 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Abca4O35600 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abca4O35600 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Abca4O35600 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Abca4O35600 Mir6982-201ENSMUST00000184354 68 ntBASIC19.87■□□□□ 0.77
Abca4O35600 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.87■□□□□ 0.77
Abca4O35600 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abca4O35600 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abca4O35600 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Abca4O35600 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Abca4O35600 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abca4O35600 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.85■□□□□ 0.77
Abca4O35600 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.85■□□□□ 0.77
Abca4O35600 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
Abca4O35600 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abca4O35600 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.85■□□□□ 0.77
Abca4O35600 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.85■□□□□ 0.77
Abca4O35600 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Abca4O35600 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abca4O35600 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Abca4O35600 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.84■□□□□ 0.77
Abca4O35600 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.84■□□□□ 0.77
Abca4O35600 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Abca4O35600 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Abca4O35600 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.83■□□□□ 0.76
Abca4O35600 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Abca4O35600 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Abca4O35600 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.82■□□□□ 0.76
Abca4O35600 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.82■□□□□ 0.76
Abca4O35600 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.82■□□□□ 0.76
Abca4O35600 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abca4O35600 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Abca4O35600 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.81■□□□□ 0.76
Abca4O35600 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Abca4O35600 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.81■□□□□ 0.76
Abca4O35600 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abca4O35600 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.81■□□□□ 0.76
Abca4O35600 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.81■□□□□ 0.76
Abca4O35600 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abca4O35600 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abca4O35600 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abca4O35600 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abca4O35600 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abca4O35600 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abca4O35600 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.79■□□□□ 0.76
Abca4O35600 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abca4O35600 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Abca4O35600 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abca4O35600 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Abca4O35600 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.79■□□□□ 0.76
Abca4O35600 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Abca4O35600 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Abca4O35600 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.78■□□□□ 0.76
Abca4O35600 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.78■□□□□ 0.76
Abca4O35600 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Abca4O35600 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abca4O35600 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.78■□□□□ 0.76
Abca4O35600 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.77■□□□□ 0.76
Abca4O35600 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abca4O35600 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Abca4O35600 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Abca4O35600 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Abca4O35600 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.76■□□□□ 0.75
Abca4O35600 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms