Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cx3cl1O35188 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.37■□□□□ 0.69
Cx3cl1O35188 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.37■□□□□ 0.69
Cx3cl1O35188 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cx3cl1O35188 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cl1O35188 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cl1O35188 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cl1O35188 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cx3cl1O35188 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.37■□□□□ 0.69
Cx3cl1O35188 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cl1O35188 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cl1O35188 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.36■□□□□ 0.69
Cx3cl1O35188 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cl1O35188 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cl1O35188 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.36■□□□□ 0.69
Cx3cl1O35188 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cl1O35188 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cx3cl1O35188 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cx3cl1O35188 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cx3cl1O35188 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cx3cl1O35188 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cx3cl1O35188 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cl1O35188 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cx3cl1O35188 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cx3cl1O35188 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cx3cl1O35188 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cx3cl1O35188 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.33■□□□□ 0.68
Cx3cl1O35188 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.33■□□□□ 0.68
Cx3cl1O35188 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cx3cl1O35188 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cx3cl1O35188 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cx3cl1O35188 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cx3cl1O35188 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cx3cl1O35188 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cx3cl1O35188 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.32■□□□□ 0.68
Cx3cl1O35188 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cx3cl1O35188 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cx3cl1O35188 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.32■□□□□ 0.68
Cx3cl1O35188 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cx3cl1O35188 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cx3cl1O35188 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cx3cl1O35188 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cx3cl1O35188 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cx3cl1O35188 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.31■□□□□ 0.68
Cx3cl1O35188 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cx3cl1O35188 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cx3cl1O35188 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cx3cl1O35188 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cx3cl1O35188 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cx3cl1O35188 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cx3cl1O35188 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cx3cl1O35188 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.29■□□□□ 0.68
Cx3cl1O35188 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cx3cl1O35188 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.29■□□□□ 0.68
Cx3cl1O35188 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cx3cl1O35188 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cx3cl1O35188 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cx3cl1O35188 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cx3cl1O35188 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cx3cl1O35188 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.28■□□□□ 0.68
Cx3cl1O35188 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Gm22238-201ENSMUST00000175222 88 ntBASIC19.28■□□□□ 0.68
Cx3cl1O35188 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cl1O35188 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cl1O35188 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cl1O35188 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cx3cl1O35188 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cx3cl1O35188 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cx3cl1O35188 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.26■□□□□ 0.67
Cx3cl1O35188 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cx3cl1O35188 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cx3cl1O35188 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cx3cl1O35188 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cl1O35188 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cl1O35188 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cl1O35188 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.25■□□□□ 0.67
Cx3cl1O35188 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cx3cl1O35188 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms