Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gfra3O35118 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gfra3O35118 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gfra3O35118 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gfra3O35118 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gfra3O35118 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gfra3O35118 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gfra3O35118 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gfra3O35118 Gm12922-201ENSMUST00000120626 809 ntBASIC17.83■□□□□ 0.44
Gfra3O35118 Gm13241-201ENSMUST00000094493 780 ntBASIC17.83■□□□□ 0.44
Gfra3O35118 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gfra3O35118 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gfra3O35118 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gfra3O35118 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Gfra3O35118 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gfra3O35118 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.82■□□□□ 0.44
Gfra3O35118 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.82■□□□□ 0.44
Gfra3O35118 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.82■□□□□ 0.44
Gfra3O35118 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.82■□□□□ 0.44
Gfra3O35118 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gfra3O35118 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.81■□□□□ 0.44
Gfra3O35118 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.81■□□□□ 0.44
Gfra3O35118 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.8■□□□□ 0.44
Gfra3O35118 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.8■□□□□ 0.44
Gfra3O35118 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gfra3O35118 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gfra3O35118 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gfra3O35118 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfra3O35118 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Gfra3O35118 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.79■□□□□ 0.44
Gfra3O35118 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gfra3O35118 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gfra3O35118 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Gfra3O35118 Gm21956-201ENSMUST00000179946 522 ntBASIC17.79■□□□□ 0.44
Gfra3O35118 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfra3O35118 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfra3O35118 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gfra3O35118 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfra3O35118 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfra3O35118 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfra3O35118 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gfra3O35118 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfra3O35118 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gfra3O35118 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfra3O35118 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.78■□□□□ 0.44
Gfra3O35118 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.78■□□□□ 0.44
Gfra3O35118 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfra3O35118 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfra3O35118 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
Gfra3O35118 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.78■□□□□ 0.44
Gfra3O35118 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Gfra3O35118 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gfra3O35118 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gfra3O35118 Golgb1-201ENSMUST00000023534 498 ntBASIC17.77■□□□□ 0.44
Gfra3O35118 Gm9870-201ENSMUST00000063874 645 ntBASIC17.77■□□□□ 0.44
Gfra3O35118 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Gfra3O35118 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gfra3O35118 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.76■□□□□ 0.43
Gfra3O35118 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.76■□□□□ 0.43
Gfra3O35118 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.76■□□□□ 0.43
Gfra3O35118 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfra3O35118 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gfra3O35118 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Gfra3O35118 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Gfra3O35118 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Gfra3O35118 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gfra3O35118 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Gfra3O35118 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.75■□□□□ 0.43
Gfra3O35118 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
Gfra3O35118 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gfra3O35118 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gfra3O35118 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gfra3O35118 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gfra3O35118 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Gfra3O35118 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms