Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav13d-3J3QMG8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Trav13d-3J3QMG8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-3J3QMG8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.19■□□□□ 0.5
Trav13d-3J3QMG8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13d-3J3QMG8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13d-3J3QMG8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav13d-3J3QMG8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav13d-3J3QMG8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13d-3J3QMG8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13d-3J3QMG8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13d-3J3QMG8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.17■□□□□ 0.5
Trav13d-3J3QMG8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Gm15546-201ENSMUST00000122095 826 ntBASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.16■□□□□ 0.5
Trav13d-3J3QMG8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13d-3J3QMG8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Gm40881-201ENSMUST00000223397 166 ntBASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Trav13d-3J3QMG8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav13d-3J3QMG8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13d-3J3QMG8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13d-3J3QMG8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13d-3J3QMG8 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.12■□□□□ 0.49
Trav13d-3J3QMG8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.12■□□□□ 0.49
Trav13d-3J3QMG8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.12■□□□□ 0.49
Trav13d-3J3QMG8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav13d-3J3QMG8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-3J3QMG8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms