Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3139J3QK78 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.65■□□□□ 0.9
Gm3139J3QK78 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.65■□□□□ 0.9
Gm3139J3QK78 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm3139J3QK78 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3139J3QK78 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Gm3139J3QK78 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3139J3QK78 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.64■□□□□ 0.89
Gm3139J3QK78 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.64■□□□□ 0.89
Gm3139J3QK78 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3139J3QK78 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3139J3QK78 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3139J3QK78 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Golgb1-201ENSMUST00000023534 498 ntBASIC20.63■□□□□ 0.89
Gm3139J3QK78 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm3139J3QK78 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.63■□□□□ 0.89
Gm3139J3QK78 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3139J3QK78 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Gm3139J3QK78 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm3139J3QK78 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3139J3QK78 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3139J3QK78 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3139J3QK78 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3139J3QK78 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Gm3139J3QK78 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3139J3QK78 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.6■□□□□ 0.89
Gm3139J3QK78 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3139J3QK78 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3139J3QK78 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3139J3QK78 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gm3139J3QK78 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gm3139J3QK78 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3139J3QK78 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3139J3QK78 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3139J3QK78 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm3139J3QK78 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm3139J3QK78 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3139J3QK78 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Gm3139J3QK78 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3139J3QK78 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3139J3QK78 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3139J3QK78 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.58■□□□□ 0.88
Gm3139J3QK78 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3139J3QK78 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Gm21956-201ENSMUST00000179946 522 ntBASIC20.56■□□□□ 0.88
Gm3139J3QK78 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.56■□□□□ 0.88
Gm3139J3QK78 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3139J3QK78 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3139J3QK78 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Gm3139J3QK78 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm3139J3QK78 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3139J3QK78 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms