Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.07■□□□□ 0.64
TprF6ZDS4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TprF6ZDS4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.07■□□□□ 0.64
TprF6ZDS4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TprF6ZDS4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.06■□□□□ 0.64
TprF6ZDS4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TprF6ZDS4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TprF6ZDS4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.06■□□□□ 0.64
TprF6ZDS4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.06■□□□□ 0.64
TprF6ZDS4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.06■□□□□ 0.64
TprF6ZDS4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TprF6ZDS4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TprF6ZDS4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.05■□□□□ 0.64
TprF6ZDS4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.05■□□□□ 0.64
TprF6ZDS4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TprF6ZDS4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TprF6ZDS4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.04■□□□□ 0.64
TprF6ZDS4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
TprF6ZDS4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TprF6ZDS4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.04■□□□□ 0.64
TprF6ZDS4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 Gm8493-201ENSMUST00000196881 489 ntBASIC19.03■□□□□ 0.64
TprF6ZDS4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.03■□□□□ 0.64
TprF6ZDS4 Gm7977-201ENSMUST00000193787 748 ntBASIC19.03■□□□□ 0.64
TprF6ZDS4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TprF6ZDS4 Gm12251-201ENSMUST00000117893 792 ntBASIC19.02■□□□□ 0.64
TprF6ZDS4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TprF6ZDS4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.02■□□□□ 0.64
TprF6ZDS4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TprF6ZDS4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TprF6ZDS4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.02■□□□□ 0.63
TprF6ZDS4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TprF6ZDS4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
TprF6ZDS4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Gm43017-201ENSMUST00000198296 752 ntBASIC19.01■□□□□ 0.63
TprF6ZDS4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.01■□□□□ 0.63
TprF6ZDS4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TprF6ZDS4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TprF6ZDS4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TprF6ZDS4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TprF6ZDS4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19■□□□□ 0.63
TprF6ZDS4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TprF6ZDS4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TprF6ZDS4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TprF6ZDS4 Gm9870-201ENSMUST00000063874 645 ntBASIC18.99■□□□□ 0.63
TprF6ZDS4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TprF6ZDS4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TprF6ZDS4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TprF6ZDS4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.99■□□□□ 0.63
TprF6ZDS4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
TprF6ZDS4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TprF6ZDS4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TprF6ZDS4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TprF6ZDS4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.98■□□□□ 0.63
TprF6ZDS4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TprF6ZDS4 Nespas-201ENSMUST00000143738 1083 ntBASIC18.98■□□□□ 0.63
TprF6ZDS4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.98■□□□□ 0.63
TprF6ZDS4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TprF6ZDS4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TprF6ZDS4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TprF6ZDS4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TprF6ZDS4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TprF6ZDS4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TprF6ZDS4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TprF6ZDS4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.97■□□□□ 0.63
TprF6ZDS4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.97■□□□□ 0.63
TprF6ZDS4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TprF6ZDS4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TprF6ZDS4 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.97■□□□□ 0.63
TprF6ZDS4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.96■□□□□ 0.63
TprF6ZDS4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TprF6ZDS4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
TprF6ZDS4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TprF6ZDS4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TprF6ZDS4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.96■□□□□ 0.63
TprF6ZDS4 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.96■□□□□ 0.63
TprF6ZDS4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TprF6ZDS4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.95■□□□□ 0.62
TprF6ZDS4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms