Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10477F6SW83 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10477F6SW83 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10477F6SW83 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10477F6SW83 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.17■□□□□ 0.66
Gm10477F6SW83 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10477F6SW83 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.16■□□□□ 0.66
Gm10477F6SW83 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10477F6SW83 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10477F6SW83 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm10477F6SW83 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm10477F6SW83 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gm10477F6SW83 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.14■□□□□ 0.65
Gm10477F6SW83 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Gm10477F6SW83 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm10477F6SW83 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm10477F6SW83 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.14■□□□□ 0.65
Gm10477F6SW83 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10477F6SW83 Terc-201ENSMUST00000082862 423 ntBASIC19.13■□□□□ 0.65
Gm10477F6SW83 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10477F6SW83 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10477F6SW83 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10477F6SW83 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10477F6SW83 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10477F6SW83 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10477F6SW83 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10477F6SW83 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm10477F6SW83 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gm10477F6SW83 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm10477F6SW83 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm10477F6SW83 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Gm10477F6SW83 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm10477F6SW83 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10477F6SW83 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm10477F6SW83 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm10477F6SW83 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm10477F6SW83 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Gm10477F6SW83 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm10477F6SW83 Gm4799-201ENSMUST00000095396 657 ntBASIC19.09■□□□□ 0.65
Gm10477F6SW83 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm10477F6SW83 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm10477F6SW83 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm10477F6SW83 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Gm10477F6SW83 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Gm10477F6SW83 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.08■□□□□ 0.64
Gm10477F6SW83 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gm10477F6SW83 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm10477F6SW83 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Gm10477F6SW83 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm10477F6SW83 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm10477F6SW83 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.07■□□□□ 0.64
Gm10477F6SW83 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.07■□□□□ 0.64
Gm10477F6SW83 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm10477F6SW83 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Gm10477F6SW83 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm10477F6SW83 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms