Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.57■□□□□ 0.88
Gm28043E0CXC2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28043E0CXC2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28043E0CXC2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Gm28043E0CXC2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28043E0CXC2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28043E0CXC2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm28043E0CXC2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.55■□□□□ 0.88
Gm28043E0CXC2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28043E0CXC2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Gm28043E0CXC2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28043E0CXC2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28043E0CXC2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28043E0CXC2 Gm45444-201ENSMUST00000211394 898 ntBASIC20.52■□□□□ 0.88
Gm28043E0CXC2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28043E0CXC2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Iqck-206ENSMUST00000208658 2891 ntBASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28043E0CXC2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28043E0CXC2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Gm28043E0CXC2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28043E0CXC2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms