Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm11127A7VMS2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm11127A7VMS2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm11127A7VMS2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm11127A7VMS2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm11127A7VMS2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm11127A7VMS2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gm11127A7VMS2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm11127A7VMS2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm11127A7VMS2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm11127A7VMS2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm11127A7VMS2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Gm14523-201ENSMUST00000117260 558 ntBASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm11127A7VMS2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.09■□□□□ 0.49
Gm11127A7VMS2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm11127A7VMS2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.08■□□□□ 0.48
Gm11127A7VMS2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Gm7332-201ENSMUST00000118351 454 ntBASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm11127A7VMS2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm11127A7VMS2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm11127A7VMS2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm11127A7VMS2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms