Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-2A0A140T8N6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm10399-202ENSMUST00000202768 748 ntBASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm5812-201ENSMUST00000061073 957 ntBASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-2A0A140T8N6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbv13-2A0A140T8N6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.35□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.35□□□□□ -0.11
Trbv13-2A0A140T8N6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-2A0A140T8N6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-2A0A140T8N6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.35□□□□□ -0.11
Trbv13-2A0A140T8N6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-2A0A140T8N6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trbv13-2A0A140T8N6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv13-2A0A140T8N6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-2A0A140T8N6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Gm15546-201ENSMUST00000122095 826 ntBASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv13-2A0A140T8N6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-2A0A140T8N6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-2A0A140T8N6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms