Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav13n-4A0A0G2JG01 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav13n-4A0A0G2JG01 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trav13n-4A0A0G2JG01 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trav13n-4A0A0G2JG01 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13n-4A0A0G2JG01 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.64■□□□□ 0.25
Trav13n-4A0A0G2JG01 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13n-4A0A0G2JG01 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13n-4A0A0G2JG01 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Gm7417-201ENSMUST00000192950 473 ntBASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-4A0A0G2JG01 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-4A0A0G2JG01 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trav13n-4A0A0G2JG01 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13n-4A0A0G2JG01 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13n-4A0A0G2JG01 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13n-4A0A0G2JG01 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav13n-4A0A0G2JG01 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav13n-4A0A0G2JG01 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.61■□□□□ 0.25
Trav13n-4A0A0G2JG01 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-4A0A0G2JG01 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13n-4A0A0G2JG01 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav13n-4A0A0G2JG01 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13n-4A0A0G2JG01 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13n-4A0A0G2JG01 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav13n-4A0A0G2JG01 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav13n-4A0A0G2JG01 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13n-4A0A0G2JG01 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13n-4A0A0G2JG01 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13n-4A0A0G2JG01 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13n-4A0A0G2JG01 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-4A0A0G2JG01 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms