Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9n-2A0A0G2JDP3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.95□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9n-2A0A0G2JDP3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms