Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav19A0A0B4J1K4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav19A0A0B4J1K4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav19A0A0B4J1K4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav19A0A0B4J1K4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav19A0A0B4J1K4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav19A0A0B4J1K4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav19A0A0B4J1K4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav19A0A0B4J1K4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav19A0A0B4J1K4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
Trav19A0A0B4J1K4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav19A0A0B4J1K4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.33■□□□□ 0.04
Trav19A0A0B4J1K4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav19A0A0B4J1K4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav19A0A0B4J1K4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav19A0A0B4J1K4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav19A0A0B4J1K4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms