Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav4-3A0A0B4J1K1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-3A0A0B4J1K1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-3A0A0B4J1K1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-3A0A0B4J1K1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-3A0A0B4J1K1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-3A0A0B4J1K1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-3A0A0B4J1K1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Trav4-3A0A0B4J1K1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-3A0A0B4J1K1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-3A0A0B4J1K1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms