Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.34■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.33■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv9-2A0A0B4J1J4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv9-2A0A0B4J1J4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Gm40881-201ENSMUST00000223397 166 ntBASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Gm15546-201ENSMUST00000122095 826 ntBASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Gm15820-201ENSMUST00000201566 728 ntBASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-2A0A0B4J1J4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.27■□□□□ 0.35
Ighv9-2A0A0B4J1J4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.25■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms